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OverviewFull Product DetailsAuthor: Yves Van de PeerPublisher: Springer-Verlag New York Inc. Imprint: Springer-Verlag New York Inc. Edition: 1st ed. 2023 Volume: 2545 Weight: 1.186kg ISBN: 9781071625606ISBN 10: 1071625608 Pages: 515 Publication Date: 02 February 2023 Audience: Professional and scholarly , Professional & Vocational Format: Hardback Publisher's Status: Active Availability: Manufactured on demand  We will order this item for you from a manufactured on demand supplier. Table of ContentsPART I Comparative genomics to study (paleo)polyploidy 1. Inference of Ancient Polyploidy from Genomic Data Hengchi Chen and Arthur Zwaenepoel 2. Navigating the CoGe Online Software Suite for Polyploidy Research Victor A. Albert and Trevor J. Krabbenhoft 3. Inference of Ancient Polyploidy Using Transcriptome Data Jia Li, Yves Van de Peer, and Zhen Li 4. POInT: Modeling Polyploidy in the Era of Ubiquitous Genomics Gavin C. Conant 5. Applying Machine Learning to Classify the Origins of Gene Duplications Michael T.W. McKibben and Michael S. Barker PART II Phylogenetics to study Polyploidy 6. Phasing gene copies into polyploid subgenomes using a Bayesian phylogenetic approach William A. Freyman and Carl J. Rothfels 7. Constraining Whole-Genome Duplication Events in Geological Time James W. Clark and Philip C. J. Donoghue 8. SCORPiOs, a Novel Method to Reconstruct Gene Phylogenies in the Context of a Known WGD Event Elise Parey, Hugues Roest Crollius, and Camille Berthelot 9. Inferring Chromosome Number Changes Along a Phylogeny Using chromEvol Anna Rice and Itay Mayrose 10 PURC v2.0: A Program for Improved Sequence Inference for Polyploid Phylogenetics and Other Manifestations of the Multiple-Copy Problem Peter Schafran, Fay-Wei Li, and Carl J. Rothfels PART III Analysis of Gene Expression and Regulation in Polyploids 11 Analyses of Genome Regulatory Evolution Following Whole-Genome Duplication Using the Phylogenetic EVE Model Ksenia Arzumanova, Rori V. Rohlfs, Lars Grønvold, Marius A. Strand, Torgeir R. Hvidsten, and Simen R. Sandve 12 Beyond Transcript Concentrations: Quantifying Polyploid Expression Responses Per Biomass, Per Genome, and Per Cell with RNA-Seq Jeremy Coate 13 A Robust Methodology for Assessing Homoeolog-Specific Expression J. Lucas Boatwright PART IV Population Genomics Approaches to study Polyploidy 14 Analyzing Autopolyploid Genetic Data Using GenoDive Patrick G. Meirmans 15 Inference of Polyploid Origin and Inheritance Mode from Population Genomic Data Alison Dawn Scott, Jozefien D. Van de Velde, and Polina Yu. Novikova 16 Population Genomic Analysis of Diploid - Autopolyploid Species Magdalena Bohutinská, Jakub Vlček, Patrick Monnahan, and Filip Kolář 17 Inferring the Demographic History and Inheritance Mode of Tetraploid Species using ABC Camille Roux, Xavier Vekemans, and John Pannell PART V Experimental Approaches to Study Polyploidy 18 Studying Whole-Genome Duplication Using Experimental Evolution of Chlamydomonas Quinten Bafort, Lucas Prost, Eylem Aydogdu, Antoine Van de Vloet, Griet Casteleyn, Yves Van de Peer, and Olivier De Clerck 19 Studying Whole-Genome Duplication Using Experimental Evolution of Spirodela polyrhiza Tian Wu, Annelore Natran, Lucas Prost, Eylem Aydogdu, Yves Van de Peer, and Quinten Bafort 20 Experimental Approaches to Generate and Isolate Human Tetraploid Cells Sara Vanessa Bernhard, Simon Gemble, Renata Basto, and Zuzana Storchova 21 Measuring Cellular Ploidy In Situ by Light Microscopy Delisa E. Clay, Benjamin M. Stormo, and Donald T. Fox 22 Using Mosaic Cell Labelling to Visualize Polyploid Cells in the Drosophila brain Shyama Nandakumar, and Laura Buttitta PART VI Sequencing, Assembling, Editing and Engineering Polyploid Genomes 23 Sequencing and Assembly of Polyploid Genomes Yibin Wang, Jiaxin Yu, Mengwei Jiang, Wenlong Lei, Xingtan Zhang, and Haibao Tang 24 Genome Editing by CRISPR/Cas9 in Polyploids Carlos Sánchez-Gómez, David Posé, and Carmen Martín-Pizarro 25 Developing a CRISPR system in non-genetic model polyploids Shengchen Shan, Bing Yang, Bernard A. Hauser, Pamela S. Soltis, and Douglas E. Soltis 26 Efficiently Editing Multiple Duplicated Homeologs and Alleles for Recurrent Polyploids Rui-Hai Gan, Li Zhou, and Jian-Fang GuiReviewsAuthor InformationTab Content 6Author Website:Countries AvailableAll regions |
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