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OverviewFull Product DetailsAuthor: Alejandro Pereira-Santana , Samuel David Gamboa-Tuz , Luis Carlos Rodríguez-ZapataPublisher: Springer-Verlag New York Inc. Imprint: Springer-Verlag New York Inc. Edition: 1st ed. 2022 Volume: 2512 Weight: 0.780kg ISBN: 9781071624289ISBN 10: 1071624288 Pages: 294 Publication Date: 13 July 2022 Audience: Professional and scholarly , Professional & Vocational Format: Hardback Publisher's Status: Active Availability: Manufactured on demand We will order this item for you from a manufactured on demand supplier. Table of ContentsPart I: Phylogenetics and Evolution 1. Orthology Prediction and Phylogenetic Analysis Methods in Plants Abdoallah Sharaf and Sawsan Elateek 2. Species Tree Inference with SNP Data Michael Matschiner 3. High-Throughput Evolutionary Comparative Analysis of Long Intergenic Non-Coding RNAs in Multiple Organisms Anna C. Nelson Dittrich and Andrew D.L. Nelson 4. NGS-Indel Coder v2.0: A Streamlined Pipeline to Code Indel Characters in Phylogenomic Data Julien Boutte, Mark Fishbein, and Shannon C.K. Straub 5. An SGSGeneloss-Based Method for Constructing a Gene Presence/Absence Table Using Mosdepth Cassandria G. Tay Fernandez, Jacob I. Marsh, Benjamin J. Nestor, Mitchell Gill, Agnieszka A. Golicz, Philipp E. Bayer, and David Edwards 6. POInT: A Tool for Modeling Ancient Polyploidies Using Multiple Polyploid Genomes Yue Hao and Gavin C. Conant Part II: Omics Analysis 7. Searching for Homologous Genes Using Daisychain Philipp E. Bayer and David Edwards 8. Detecting MicroRNAs in Plant Genomes with miRkwood Sylvain Legrand, Isabelle Guigon, and Hélène Touzet 9. Pangenome Analysis of Plant Transcripts and Coding Sequences Bruno Contreras-Moreira, Alvaro Rodriguez del Río, Carlos P. Cantalapiedra, Rubén Sancho, and Pablo Vinuesa 10. Metagenomics Bioinformatic Pipeline Diego Garfias-Gallegos, Claudia Zirión-Martínez, Edder D. Bustos-Díaz, Tania Vanessa Arellano-Fernandez, José Abel Lovaco-Flores, Aarón Espinosa-Jaime, J. Abraham Avelar-Rivas, and Nelly Sélem-Mójica 11. Rhizosphere and Endosphere Bacterial Communities Survey by Metagenomics Approach Victoria Mesa 12. Applying Synteny Networks (SynNet) to Study Genomic Arrangements of Protein-Coding Genes in Plants Samuel David Gamboa-Tuz, Alejandro Pereira-Santana, Tao Zhao, and M. Eric Schranz 13. Plant In Situ Hi-C Experimental Protocol and Bioinformatic Analysis Francisco J. Pérez-de los Santos, Jesús Emiliano Sotelo-Fonseca, América Ramírez-Colmenero, Hans-Wilhelm Nützmann, Selene L. Fernandez-Valverde, and Katarzyna Oktaba 14. Isolation of Boechera stricta Developing Embryos for Hi-C Mariana Tiscareño-Andrade, Katarzyna Oktaba, and Jean-Philippe Vielle-Calzada Part III: Experimental Procedures for Trait Characterization 15. Discovering the Secrets of Ancient Plants: Recovery of DNA from Museum and Archaeological Plant Specimens Oscar Estrada, Stephen M. Richards, and James Breen 16. Use of Allele-Specific Amplification for Rapid Identification of Aromatic and Non-Aromatic Rice Germplasms Debarati Chakraborty 17. Efficient Protein Extraction Protocols for NanoLC-MS/MS Proteomics Analysis of Plant Tissues with High Proteolytic Activity: A Case Study with Pineapple Pulp Esaú Bojórquez-Velázquez, José M. Elizalde-Contreras, Jesús Alejandro Zamora-Briseño, and Eliel Ruiz-MayReviewsAuthor InformationTab Content 6Author Website:Countries AvailableAll regions |